- Sakurai N, Mardani-Korrani H, Nakayasu M, Matsuda K, Ochiai K, Kobayashi M, Tahara Y, Onodera T, Aoki Y, Motobayashi T, Komatsuzaki M, Ihara M, Shibata D, Fujii Y, Sugiyama A (2020) Metabolome analysis identified okaramines in the soybean rhizosphere as a legacy of hairy vetch. Frontiers in Genetics 11: 114
- Ochiai K, Uesugi A, Masuda Y, Nishii M, Matoh T (2020) Overexpression of exogenous biuret hydrolase in rice plants confers tolerance to biuret toxicity. Plant Direct 4:1–12.
- Yamazaki S, Ochiai K, Matoh T (2019) Rice plants have three homologs of glutathione synthetase genes, one of which, OsGS2, codes for hydroxymethyl-glutathione synthetase. Plant direct, 3: 1-10
- Kitajima S, Aoki W, Shibata D, Nakajima D, Sakurai N, Yazaki K, Munakata R, Taira T, Kobayashi M, Aburaya S, Eric Hyrmeya Savadogo EH, Hibino S, Yano H (2018) Comparative multi-omics analysis reveals diverse latex-based defense strategies against pests among latex-producing organs of the fig tree (Ficus carica). Planta 247: 1423–1438
- Zhou Y, Kobayashi M, Awano T, Matoh T, Takabe K (2018) A new monoclonal antibody against rhamnogalacturonan II and its application to immunocytochemical detection of rhamnogalacturonan II in Arabidopsis roots. Bioscience, Biotechnology, and Biochemistry 82: 1780–1789
- Yamazaki S, Ueda Y, Mukai A, Ochiai K, Matoh T (2018) Rice phytochelatin synthases OsPCS1 and OsPCS2 make different contributions to cadmium and arsenic tolerance. Plant Direct 2: 1-15.
- Kobayashi M, Miyamoto M, Matoh T, Kitajima S, Hanano S, Sumerta IN, Narise T, Suzuki H, Sakurai N, Shibata D (2017) Mechanism underlying rapid responses to boron deprivation in Arabidopsis roots. Soil Science and Plant Nutrition 64: 106–115
- Zhou Y, Awano T, Kobayashi M, Matoh T, Takabe K (2017) Immunocytochemical detection of rhamnogalacturonan II on forming cell plates in cultured tobacco cells. Bioscience, Biotechnology, and Biochemistry 81: 899-905.
- 松原圭佑, 間藤 徹 (2017) メタン発酵消化液の窒素肥効を稲わら同時施用によって維持する試み 日本土壌肥料学雑誌 88:441–446.
- 松原圭佑,落合久美子,間藤徹(2016)水稲栽培の基肥としてのメタン発酵消化液の適正な施用方法の検討 日本土壌肥料学雑誌 87: 110-119.
- Miyamoto T, Ochiai K, Nonoue Y, Matsubara K, Yano M, Matoh T. (2015) Expression level of the sodium transporter gene OsHKT2;1 determines sodium accumulation of rice cultivars under potassium-deficient conditions. Soil Science and Plant Nutrition 61: 481-492.
- Oiwa Y, Kitayama K, Kobayashi M, Matoh T (2013) Boron deprivation immediately causes cell death in growing roots of Arabidopsis thaliana. Soil Science and Plant Nutrition 59: 621-627.
- Tsuyama T, Kawai R, Shitan N, Matoh T, Sugiyama J, Yoshinaga A, Takabe K, Fujita M, Yazaki K (2013) Proton-dependent conifer in transport, a common major transport event in differentiating xylem tissue of woody plants. Plant Physiology 162: 918-926.
- Koshiba T, Kobayashi M, Matsuoka K, Fujiwara T, Matoh T (2013) Boron nutrition of cultured tobacco BY-2 cells. VII. Rapid induction of metabolic dysfunction in cells deprived of boron as revealed by microarray analysis. Soil Science and Plant Nutrition 59: 189-194.
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Miyamoto T, Ochiai K, Takeshita S, Matoh T (2012) Identification of quantitative trait loci associated with shoot sodium accumulation under low potassium conditions in rice plants. Soil Science and Plant Nutrition 58: 728-736.
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Sriprachote A, Kanyawongha P, Pantuwan G, Ochiai K, Matoh T (2012) Evaluation of Thai rice cultivars with low–grain cadmium. Soil Science and Plant Nutrition 58: 568-572.
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Sriprachote A, Kanyawongha P, Ochiai K, Matoh T. (2012) Current situation of cadmium–polluted paddy soil, rice and soybean in the Mae Sot District, Tak Province, Thailand. Soil Science and Plant Nutrition 58: 349-359.
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Ochiai K, Shimizu A, Okumoto Y, Fujiwara T, Matoh T. (2011) Suppression of a NAC–like transcription factor gene improves boron–toxicity tolerance in rice. Plant Physiology 156: 1457-1463.
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Kobayashi, M., Kouzu, N., Inami, A., Toyooka, K., Konishi, Y., Matsuoka, K., and Matoh, T. (2011). Characterization of Arabidopsis CTP:3-deoxy-D-manno-2-octulosonate cytidylyltransferase (CMP-KDO synthetase), the enzyme that activates KDO during rhamnogalacturonan II biosynthesis. Plant & Cell Physiology 52: 1832–1843.
- Koshiba T, Kobayashi M, Ishihara A, Matoh T. (2010) Boron nutrition of cultured tobacco BY-2 cells. VI. Calcium is involved in early responses to boron deprivation. Plant & Cell Physiology 51: 323-327.
- Fujiwara T, Matoh T (2009) Plant nutrition–Roots of life for fundamental biology and better crop production. Plant & Cell Physiology 50: 2-4.
- Koshiba T, Kobayashi M, Matoh T. (2009) Boron nutrition of tobacco BY-2 cells. V. Oxidative damage is the major cause of cell death induced by boron deprivation. Plant & Cell Physiology 50: 26-36.
- Ochiai K, Uemura S, Shimizu A, Okumoto Y, Matoh T. (2008) Boron toxicity in rice (Oryza sativa L.). I. Quantitative Trait Locus (QTL) analysis of tolerance to boron toxicity. Theoretical and Applied Genetics 117: 125-133.
- 松田晃, 山崎恭子, 間藤徹 (2007) 化学分析と小ポット栽培試験による家畜排泄物堆肥の窒素肥効の評価 日本土壌肥料学雑誌 78: 479-485.
- 松田晃, 渡辺亮, 落合久美子, 間藤徹 (2006) 京都市近郊で市販されている堆肥・有機質資材の二酸化炭素発生速度に基づく品質評価の試み 日本土壌肥料学雑誌 77: 387-393.
- Kohorn BD, Kobayashi M, Johansen S, Riese J, Huang LF Koch K, Fu S, Dotson A, Byers N. (2006) An Arabidopsis cell wall-associated kinase required for invertase activity and cell growth. The Plant Journal 46: 307-316.
- Kohorn BD, Kobayashi M, Johansen S, Friedman HP, Fischer A, Byers N. (2006) Wall-associated kinase 1 (WAK1) is crosslinked in endomembranes, and transport to the cell surface requires correct cell-wall synthesis. Journal of Cell Science 119: 2282-2290.
- Matoh T, Ochiai K. (2005) Distribution and partitioning of newly taken-up boron in sunflower. Plant and Soil 278: 351-360.
- Kobayashi M, Mutoh T, Matoh T. (2004) Boron nutrition of cultured tobacco BY-2 cells. IV. Genes induced under low boron supply. Journal of Experimental Botany 55: 1441-1443.
- 松田晃, 大野佳織, 長久保有之, 間藤徹 (2007) 食品工業汚泥堆肥に含まれる窒素の形態による利用率の違い -重窒素標識堆肥とイタリアンライグラスを用いた検討- 日本土壌肥料学雑誌 78: 317-321.
- Matsuura K, Miyagawa I, Kobayashi M, Ohta D, Matoh T (2003) Arabidopsis 3-deoxy-D-manno-oct-2-ulosonate-8-phosphate synthase: cDNA cloning and expression analyses. Journal of Experimental Botany 54: 1785-1787.